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Finding the Longest Common Increasing Subsequence: A Comprehensive Guide

February 21, 2025Film3987
Finding the Longest Common Increasing Subsequence: A Comprehensive Gui

Finding the Longest Common Increasing Subsequence: A Comprehensive Guide

When dealing with string comparison and sequence analysis, identifying the longest common increasing subsequence (LCIS) is a fundamental task. This article provides a detailed guide on how to find the LCIS using a dynamic programming approach. We'll cover the steps, the implementation, and the complexity analysis of this method.

What is a Longest Common Increasing Subsequence (LCIS)?

The longest common increasing subsequence between two strings is a sequence of characters that appear in both strings in the same order and are strictly increasing. For example, if you have two strings A 'abc' and B 'abceac', the LCIS is 'abc', as it appears in both strings in the same order and is strictly increasing.

Steps to Find the LCIS

To implement the LCIS, we can use a dynamic programming approach. Here's a step-by-step guide:

Initialization

A and B are the two input strings. m is the length of A and n is the length of B. Create a 2D array dp of size (m 1) * (n 1) to store the lengths of LCIS.

Dynamic Programming Table

Iterate through each character of A and B. If A[i-1] B[j-1], update the dp value to dp[i-1][j-1] 1 if the previous character of A is less than the current character of B. If they are not equal, carry forward the maximum value from the previous row or the same column.

Track the Length

Keep track of the maximum length of the LCIS found during the iterations.

Reconstruction

After filling the dp table, you can backtrack to reconstruct the LCIS. This step involves tracing back through the dp table to get the actual subsequence.

Example Code Implementation

Here's a Python implementation of the above logic:

def longest_common_increasing_subsequence(A, B):
    m, n  len(A), len(B)
    dp  [[0] * (n   1) for _ in range(m   1)]
    max_length  0
    end_index  0
    # Fill the dp table
    for i in range(1, m   1):
        for j in range(1, n   1):
            if A[i - 1]  B[j - 1]:
                if i - 2 > 0 and j - 2 > 0 and A[i - 2]  max_length:
                max_length  dp[i][j]
                end_index  j
    # Reconstruct the LCIS
    lcis  []
    for i in range(m, 0, -1):
        for j in range(end_index, 0, -1):
            if dp[i][j]  max_length and not lcis or A[i - 1] > lcis[-1]:
                (A[i - 1])
                max_length - 1
                end_index  j - 1
                break
    return ''.join(lcis)

Example Usage

Example: A 'abc' B 'abceac' print(longest_common_increasing_subsequence(A, B)) Output: abc

Explanation of the Code

The dp table stores the lengths of the longest common increasing subsequences found up to each character. The nested loops compare characters of both strings and update the dp table based on matching characters and the increasing condition. Finally, the LCIS is reconstructed by backtracking through the dp table.

Complexity

Time Complexity: O(m * n) where m and n are the lengths of the two strings.

Space Complexity: O(m * n) for the dp table.

This approach efficiently finds the longest common increasing subsequence for two strings, making it a valuable tool in various applications such as bioinformatics, text analysis, and more.